Please contact us at
inquiry@catalystneuro.com
Clients
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Role - NWB specialist and developer
Axona Data Processing Columbia University
Collaboration with - Columbia University
The CatalystNeuro team worked with Dr. Hussaini and his lab to utilize a state-of-the-art preprocessing workflow on electrophysiological data collected as part of their research on Alzheimer’s Disease. Data was being collected from the Axona acquisition system and from Intan. They used MountainSort and were interested in comparing these results to other cutting-edge spike sorters and accelerating data processing through curation using spike train metrics, consensus across sorters, and finally manual curation. They wanted the output of this processing system to be capable of writing the results in TINT format. We built this system in SpikeInterface, a package designed to build modular spike sorting pipelines.
Availability for helping other labs
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We are always interested in opportunities to work with labs on data infrastructure. We have a team of computational neuroscientists who are experts in building conversion scripts, porting tools to NWB, and helping to package and publicly release data. We also have experience building custom databases and user interfaces for lab experimental records. If you are interested in working with us
Our work is entirely open source. See our GitHub organization for code of past and ongoing projects.
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